Carnation DB

Dca57130.1

Annotation

7-exons
f-1
sp|F6GWG2_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_05s0029g00130#GO:0005622;GO:0003677#1F0P1C
AT1G04880.1 | Symbols: | HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain | chr1:1376106-1378264 REVERSE LENGTH=448
Repeat List (scaffold8173)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca57130.1	15	340	404	50.49	326	61	8e-115
Target_name	Start	End	Length	Cov(%)
sp\|F6GWG2_VITVI	40	374	482	69.5

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca57130.1	22	340	404	48.76	319	60	9e-102
Target_name	Start	End	Length	Cov(%)
AT1G04880.1	20	347	448	73.21

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold8173	Augustus	mRNA	12474	15461	.	+	.	ID=Dca57130.1;Parent=Dca57130
scaffold8173	Augustus	exon	12474	12631	.	+	.	ID=Dca57130.1.exon1;Parent=Dca57130.1
scaffold8173	Augustus	exon	13303	13381	.	+	.	ID=Dca57130.1.exon2;Parent=Dca57130.1
scaffold8173	Augustus	exon	13638	13800	.	+	.	ID=Dca57130.1.exon3;Parent=Dca57130.1
scaffold8173	Augustus	exon	13897	14013	.	+	.	ID=Dca57130.1.exon4;Parent=Dca57130.1
scaffold8173	Augustus	exon	14371	14756	.	+	.	ID=Dca57130.1.exon5;Parent=Dca57130.1
scaffold8173	Augustus	exon	15062	15180	.	+	.	ID=Dca57130.1.exon6;Parent=Dca57130.1
scaffold8173	Augustus	exon	15269	15461	.	+	.	ID=Dca57130.1.exon7;Parent=Dca57130.1