Carnation DB

Dca57208.1

Annotation

5-exons
f-1
sp|A9PE83_POPTR#Putative uncharacterized protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#unknown#GO:0003676;GO:0000166#2F0P0C
sp|B9SRC6_RICCO#Nucleic acid binding protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0614010#GO:0003676;GO:0000166#2F0P0C
Repeat List (scaffold82)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca57208.1	1	275	299	62.2	275	67	1e-99
Target_name	Start	End	Length	Cov(%)
sp\|A9PE83_POPTR	1	277	280	98.92

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca57208.1	1	284	299	58.52	284	61	4e-92
Target_name	Start	End	Length	Cov(%)
AT4G17720.1	1	286	313	91.37

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold82	Augustus	mRNA	84862	87481	.	+	.	ID=Dca57208.1;Parent=Dca57208
scaffold82	Augustus	exon	84862	84867	.	+	.	ID=Dca57208.1.exon1;Parent=Dca57208.1
scaffold82	Augustus	exon	85931	86034	.	+	.	ID=Dca57208.1.exon2;Parent=Dca57208.1
scaffold82	Augustus	exon	86109	86184	.	+	.	ID=Dca57208.1.exon3;Parent=Dca57208.1
scaffold82	Augustus	exon	86655	86738	.	+	.	ID=Dca57208.1.exon4;Parent=Dca57208.1
scaffold82	Augustus	exon	86852	87481	.	+	.	ID=Dca57208.1.exon5;Parent=Dca57208.1