Carnation DB

Dca57326.1

Annotation

17-exons
f-1
sp|D7SIV6_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_17s0000g04120#GO:0005622;GO:0016787;GO:0008270#2F0P1C
sp|B9RE34_RICCO#Histone deacetylase hda1, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1617710#GO:0005622;GO:0016787;GO:0008270#2F0P1C
Repeat List (scaffold821)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca57326.1	26	581	584	65.23	556	68	0
Target_name	Start	End	Length	Cov(%)
sp\|D7SIV6_VITVI	130	693	697	80.91

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca57326.1	34	551	584	55.3	518	62	3e-165
Target_name	Start	End	Length	Cov(%)
AT3G18520.2	14	524	564	90.6

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold821	Augus-PASA	mRNA	42162	54490	.	-	.	ID=Dca57326.1;Parent=Dca57326
scaffold821	Augus-PASA	exon	42162	42283	.	-	.	ID=Dca57326.1.exon1;Parent=Dca57326.1
scaffold821	Augus-PASA	exon	42908	43079	.	-	.	ID=Dca57326.1.exon2;Parent=Dca57326.1
scaffold821	Augus-PASA	exon	46877	46922	.	-	.	ID=Dca57326.1.exon3;Parent=Dca57326.1
scaffold821	Augus-PASA	exon	47020	47102	.	-	.	ID=Dca57326.1.exon4;Parent=Dca57326.1
scaffold821	Augus-PASA	exon	47190	47269	.	-	.	ID=Dca57326.1.exon5;Parent=Dca57326.1
scaffold821	Augus-PASA	exon	47720	47828	.	-	.	ID=Dca57326.1.exon6;Parent=Dca57326.1
scaffold821	Augus-PASA	exon	48210	48278	.	-	.	ID=Dca57326.1.exon7;Parent=Dca57326.1
scaffold821	Augustus	exon	48636	48686	.	-	.	ID=Dca57326.1.exon8;Parent=Dca57326.1
scaffold821	Augus-PASA	exon	48785	48910	.	-	.	ID=Dca57326.1.exon9;Parent=Dca57326.1
scaffold821	Augus-PASA	exon	48998	49121	.	-	.	ID=Dca57326.1.exon10;Parent=Dca57326.1
scaffold821	Augus-PASA	exon	49669	49724	.	-	.	ID=Dca57326.1.exon11;Parent=Dca57326.1
scaffold821	Augus-PASA	exon	52098	52162	.	-	.	ID=Dca57326.1.exon12;Parent=Dca57326.1
scaffold821	Augustus	exon	52306	52381	.	-	.	ID=Dca57326.1.exon13;Parent=Dca57326.1
scaffold821	Augustus	exon	53424	53500	.	-	.	ID=Dca57326.1.exon14;Parent=Dca57326.1
scaffold821	Augustus	exon	53690	53804	.	-	.	ID=Dca57326.1.exon15;Parent=Dca57326.1
scaffold821	Augustus	exon	53991	54167	.	-	.	ID=Dca57326.1.exon16;Parent=Dca57326.1
scaffold821	Augustus	exon	54284	54490	.	-	.	ID=Dca57326.1.exon17;Parent=Dca57326.1
scaffold821	Augus-PASA	mRNA	42193	54490	.	-	.	ID=Dca57326.2;Parent=Dca57326
scaffold821	Augus-PASA	exon	42193	42283	.	-	.	ID=Dca57326.2.exon1;Parent=Dca57326.2
scaffold821	Augustus	exon	42372	42447	.	-	.	ID=Dca57326.2.exon2;Parent=Dca57326.2
scaffold821	Augus-PASA	exon	42908	43079	.	-	.	ID=Dca57326.2.exon3;Parent=Dca57326.2
scaffold821	Augus-PASA	exon	46877	46922	.	-	.	ID=Dca57326.2.exon4;Parent=Dca57326.2
scaffold821	Augus-PASA	exon	47020	47102	.	-	.	ID=Dca57326.2.exon5;Parent=Dca57326.2
scaffold821	Augus-PASA	exon	47190	47269	.	-	.	ID=Dca57326.2.exon6;Parent=Dca57326.2
scaffold821	Augus-PASA	exon	47720	47828	.	-	.	ID=Dca57326.2.exon7;Parent=Dca57326.2
scaffold821	Augus-PASA	exon	48210	48278	.	-	.	ID=Dca57326.2.exon8;Parent=Dca57326.2
scaffold821	Augustus	exon	48636	48686	.	-	.	ID=Dca57326.2.exon9;Parent=Dca57326.2
scaffold821	Augus-PASA	exon	48785	48910	.	-	.	ID=Dca57326.2.exon10;Parent=Dca57326.2
scaffold821	Augus-PASA	exon	48998	49121	.	-	.	ID=Dca57326.2.exon11;Parent=Dca57326.2
scaffold821	Augus-PASA	exon	49669	49724	.	-	.	ID=Dca57326.2.exon12;Parent=Dca57326.2
scaffold821	Augus-PASA	exon	52098	52162	.	-	.	ID=Dca57326.2.exon13;Parent=Dca57326.2
scaffold821	Augustus	exon	52306	52381	.	-	.	ID=Dca57326.2.exon14;Parent=Dca57326.2
scaffold821	Augustus	exon	53424	53500	.	-	.	ID=Dca57326.2.exon15;Parent=Dca57326.2
scaffold821	Augustus	exon	53690	53804	.	-	.	ID=Dca57326.2.exon16;Parent=Dca57326.2
scaffold821	Augustus	exon	53991	54167	.	-	.	ID=Dca57326.2.exon17;Parent=Dca57326.2
scaffold821	Augustus	exon	54284	54490	.	-	.	ID=Dca57326.2.exon18;Parent=Dca57326.2