Carnation DB

Dca57449.1

Annotation

7-exons
f-1
sp|D7U2H4_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_07s0005g01360#GO:0008270#1F0P0C
sp|G7KST0_MEDTR#E3 ubiquitin-protein ligase MARCH3#Medicago truncatula (Barrel medic) (Medicago tribuloides)#ORFNames=MTR_7g109460#GO:0016874;GO:0008270#2F0P0C
Repeat List (scaffold826)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca57449.1	1	193	214	55.14	193	60	1e-61
Target_name	Start	End	Length	Cov(%)
sp\|D7U2H4_VITVI	1	196	221	88.68

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca57449.1	1	189	214	42.99	189	47	1e-45
Target_name	Start	End	Length	Cov(%)
AT1G02610.1	1	191	221	86.42

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold826	Augus-PASA	mRNA	6099	10940	.	-	.	ID=Dca57449.1;Parent=Dca57449
scaffold826	Augus-PASA	exon	6099	6158	.	-	.	ID=Dca57449.1.exon1;Parent=Dca57449.1
scaffold826	Augus-PASA	exon	6269	6370	.	-	.	ID=Dca57449.1.exon2;Parent=Dca57449.1
scaffold826	Augus-PASA	exon	6478	6555	.	-	.	ID=Dca57449.1.exon3;Parent=Dca57449.1
scaffold826	Augus-PASA	exon	8728	8848	.	-	.	ID=Dca57449.1.exon4;Parent=Dca57449.1
scaffold826	Augus-PASA	exon	9945	10021	.	-	.	ID=Dca57449.1.exon5;Parent=Dca57449.1
scaffold826	Augus-PASA	exon	10598	10669	.	-	.	ID=Dca57449.1.exon6;Parent=Dca57449.1
scaffold826	Augus-PASA	exon	10806	10940	.	-	.	ID=Dca57449.1.exon7;Parent=Dca57449.1