Dca57546.1
Annotation
- 3-exons
- f-817
- sp|A5BJD2_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_020846#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- sp|Q2AA50_ASPOF#Retrotransposon gag protein#Asparagus officinalis (Garden asparagus)#ORFNames=19.t00014#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold8291)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca57546.1 |
6 |
332 |
333 |
57.95 |
327 |
55 |
7e-104
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5BJD2_VITVI |
703 |
1059 |
1791 |
19.93 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca57546.1 |
153 |
328 |
333 |
18.61 |
176 |
36 |
6e-24
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0142900-02 |
229 |
386 |
707 |
22.34 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold8291 |
Augustus |
mRNA |
8460 |
10526 |
. |
- |
. |
ID=Dca57546.1;Parent=Dca57546 |
| scaffold8291 |
Augustus |
exon |
8460 |
9344 |
. |
- |
. |
ID=Dca57546.1.exon1;Parent=Dca57546.1 |
| scaffold8291 |
Augustus |
exon |
9468 |
9715 |
. |
- |
. |
ID=Dca57546.1.exon2;Parent=Dca57546.1 |
| scaffold8291 |
Augustus |
exon |
9842 |
10526 |
. |
- |
. |
ID=Dca57546.1.exon3;Parent=Dca57546.1 |
