Dca5790.1
Annotation
- 4-exons
- f-1
- sp|A5BDL4_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_017709#unknown#0F0P0C
- sp|B9GFH4_POPTR#F-box family protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_752794#unknown#0F0P0C
- Repeat List (scaffold1223)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca5790.1 |
5 |
483 |
512 |
31.44 |
479 |
33 |
4e-48
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5BDL4_VITVI |
4 |
494 |
526 |
93.34 |
AtOs (Arabidopsis thaliana & Oryza sativa)
No data
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1223 |
Augustus |
mRNA |
49728 |
53498 |
. |
- |
. |
ID=Dca5790.1;Parent=Dca5790 |
| scaffold1223 |
Augustus |
exon |
49728 |
50087 |
. |
- |
. |
ID=Dca5790.1.exon1;Parent=Dca5790.1 |
| scaffold1223 |
Augustus |
exon |
50655 |
50825 |
. |
- |
. |
ID=Dca5790.1.exon2;Parent=Dca5790.1 |
| scaffold1223 |
Augus-PASA |
exon |
51884 |
52492 |
. |
- |
. |
ID=Dca5790.1.exon3;Parent=Dca5790.1 |
| scaffold1223 |
Augus-PASA |
exon |
53100 |
53498 |
. |
- |
. |
ID=Dca5790.1.exon4;Parent=Dca5790.1 |
