Carnation DB

Dca5791.1

Annotation

5-exons
f-1
sp|F4NCG1_BETVU#Putative uncharacterized protein#Beta vulgaris subsp vulgaris#unknown#GO:0003723;GO:0003964;GO:0006278#2F1P0C
Os03t0643433-00 Similar to J013022N21, full insert sequence.
Repeat List (scaffold1223)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5791.1	2	115	148	37.83	114	50	2e-24
Target_name	Start	End	Length	Cov(%)
sp\|F4NCG1_BETVU	620	733	1110	10.27

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5791.1	6	114	148	23.64	109	32	2e-08
Target_name	Start	End	Length	Cov(%)
Os03t0643433-00	146	255	644	17.08

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1223	Augustus	mRNA	67517	68808	.	-	.	ID=Dca5791.1;Parent=Dca5791
scaffold1223	Augustus	exon	67517	67638	.	-	.	ID=Dca5791.1.exon1;Parent=Dca5791.1
scaffold1223	Augustus	exon	67737	67800	.	-	.	ID=Dca5791.1.exon2;Parent=Dca5791.1
scaffold1223	Augustus	exon	68116	68176	.	-	.	ID=Dca5791.1.exon3;Parent=Dca5791.1
scaffold1223	Augustus	exon	68269	68320	.	-	.	ID=Dca5791.1.exon4;Parent=Dca5791.1
scaffold1223	Augustus	exon	68415	68808	.	-	.	ID=Dca5791.1.exon5;Parent=Dca5791.1