Carnation DB

Dca57926.1

Annotation

9-exons
f-1
sp|G5DWV8_SILLA#Putative uncharacterized protein#Silene latifolia (White campion) (Bladder campion)#unknown#unknown#0F0P0C
AT3G01810.1 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: nucleolar protein gar2-related (TAIR:AT2G42320.2); Has 1327 Blast hits to 470 proteins in 132 species: Archae - 2; Bacteria - 131; Metazoa - 139; Fungi - 114; Plants - 114; Viruses - 0; Other Eukaryotes - 827 (source: NCBI BLink). | chr3:289218-292557 FORWARD LENGTH=921
Repeat List (scaffold841)

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca57926.1	196	913	917	53.32	718	67	0
Target_name	Start	End	Length	Cov(%)
sp\|G5DWV8_SILLA	38	756	757	94.98

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca57926.1	1	911	917	49.5	911	47	0
Target_name	Start	End	Length	Cov(%)
AT3G01810.1	1	917	921	99.56

seqname	source	feature	start	end	score	strand	frame	group
scaffold841	Augustus	mRNA	78507	84252	.	+	.	ID=Dca57926.1;Parent=Dca57926
scaffold841	Augustus	exon	78507	78885	.	+	.	ID=Dca57926.1.exon1;Parent=Dca57926.1
scaffold841	Augustus	exon	79018	79205	.	+	.	ID=Dca57926.1.exon2;Parent=Dca57926.1
scaffold841	Augustus	exon	79344	80170	.	+	.	ID=Dca57926.1.exon3;Parent=Dca57926.1
scaffold841	Augustus	exon	80701	80992	.	+	.	ID=Dca57926.1.exon4;Parent=Dca57926.1
scaffold841	Augustus	exon	81094	81318	.	+	.	ID=Dca57926.1.exon5;Parent=Dca57926.1
scaffold841	Augustus	exon	82207	82380	.	+	.	ID=Dca57926.1.exon6;Parent=Dca57926.1
scaffold841	Augustus	exon	82877	83077	.	+	.	ID=Dca57926.1.exon7;Parent=Dca57926.1
scaffold841	Augustus	exon	83160	83273	.	+	.	ID=Dca57926.1.exon8;Parent=Dca57926.1
scaffold841	Augustus	exon	83899	84252	.	+	.	ID=Dca57926.1.exon9;Parent=Dca57926.1