Dca57956.1
Annotation
- 4-exons
- f-1
- sp|G9FIF2_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0004190;GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006508;GO:0006278#4F3P0C
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold8423)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca57956.1 |
1 |
331 |
538 |
41.26 |
331 |
68 |
6e-134
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|G9FIF2_BETVU |
1177 |
1507 |
1553 |
21.31 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca57956.1 |
127 |
333 |
538 |
18.4 |
207 |
48 |
2e-58
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os03t0627900-01 |
8 |
214 |
230 |
90 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold8423 |
Augustus |
mRNA |
7829 |
10417 |
. |
- |
. |
ID=Dca57956.1;Parent=Dca57956 |
| scaffold8423 |
Augustus |
exon |
7829 |
8008 |
. |
- |
. |
ID=Dca57956.1.exon1;Parent=Dca57956.1 |
| scaffold8423 |
Augustus |
exon |
8086 |
8318 |
. |
- |
. |
ID=Dca57956.1.exon2;Parent=Dca57956.1 |
| scaffold8423 |
Augustus |
exon |
8408 |
8567 |
. |
- |
. |
ID=Dca57956.1.exon3;Parent=Dca57956.1 |
| scaffold8423 |
Augustus |
exon |
9374 |
10417 |
. |
- |
. |
ID=Dca57956.1.exon4;Parent=Dca57956.1 |
