Carnation DB

Dca57993.1

Annotation

5-exons
f-1
sp|B9IFF1_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_252798#GO:0000166;GO:0016491#2F0P0C
AT5G50700.1 | Symbols: HSD1 | hydroxysteroid dehydrogenase 1 | chr5:20623259-20624995 REVERSE LENGTH=349
Repeat List (scaffold844)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca57993.1	5	197	319	34.48	193	57	2e-62
Target_name	Start	End	Length	Cov(%)
sp\|B9IFF1_POPTR	61	252	311	61.73

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca57993.1	5	184	319	32.6	180	58	6e-62
Target_name	Start	End	Length	Cov(%)
AT5G50700.1	61	240	349	51.57

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold844	Augustus	mRNA	78215	80612	.	+	.	ID=Dca57993.1;Parent=Dca57993
scaffold844	Augustus	exon	78215	78422	.	+	.	ID=Dca57993.1.exon1;Parent=Dca57993.1
scaffold844	Augustus	exon	78538	78623	.	+	.	ID=Dca57993.1.exon2;Parent=Dca57993.1
scaffold844	Augustus	exon	78779	78910	.	+	.	ID=Dca57993.1.exon3;Parent=Dca57993.1
scaffold844	Augustus	exon	79248	79380	.	+	.	ID=Dca57993.1.exon4;Parent=Dca57993.1
scaffold844	Augustus	exon	80212	80612	.	+	.	ID=Dca57993.1.exon5;Parent=Dca57993.1