Dca58118.1
Annotation
- 3-exons
- f-1
- sp|D3IVT9_9POAL#Putative retrotransposon protein#Phyllostachys edulis#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold8481)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca58118.1 |
284 |
390 |
392 |
15.81 |
107 |
58 |
1e-31
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D3IVT9_9POAL |
1207 |
1313 |
1313 |
8.14 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca58118.1 |
275 |
375 |
392 |
9.43 |
101 |
37 |
4e-11
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
1284 |
1382 |
1401 |
7.06 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold8481 |
Augustus |
mRNA |
1562 |
3458 |
. |
- |
. |
ID=Dca58118.1;Parent=Dca58118 |
| scaffold8481 |
Augustus |
exon |
1562 |
1890 |
. |
- |
. |
ID=Dca58118.1.exon1;Parent=Dca58118.1 |
| scaffold8481 |
Augustus |
exon |
2069 |
2118 |
. |
- |
. |
ID=Dca58118.1.exon2;Parent=Dca58118.1 |
| scaffold8481 |
Augustus |
exon |
2659 |
3458 |
. |
- |
. |
ID=Dca58118.1.exon3;Parent=Dca58118.1 |
