Carnation DB

Dca58179.1

Annotation

11-exons
f-1
sp|D7SPM8_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_04s0023g00780#unknown#0F0P0C
AT1G65260.1 | Symbols: PTAC4, VIPP1 | plastid transcriptionally active 4 | chr1:24236329-24240428 FORWARD LENGTH=330
Repeat List (scaffold85)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca58179.1	2	329	329	75.68	328	76	3e-141
Target_name	Start	End	Length	Cov(%)
sp\|D7SPM8_VITVI	1	324	324	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca58179.1	32	329	329	70.51	298	78	7e-134
Target_name	Start	End	Length	Cov(%)
AT1G65260.1	36	330	330	89.39

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold85	Augus-PASA	mRNA	57406	60794	.	+	.	ID=Dca58179.1;Parent=Dca58179
scaffold85	Augus-PASA	exon	57406	57532	.	+	.	ID=Dca58179.1.exon1;Parent=Dca58179.1
scaffold85	Augus-PASA	exon	58371	58486	.	+	.	ID=Dca58179.1.exon2;Parent=Dca58179.1
scaffold85	Augus-PASA	exon	58590	58700	.	+	.	ID=Dca58179.1.exon3;Parent=Dca58179.1
scaffold85	Augus-PASA	exon	58831	58895	.	+	.	ID=Dca58179.1.exon4;Parent=Dca58179.1
scaffold85	Augus-PASA	exon	58988	59069	.	+	.	ID=Dca58179.1.exon5;Parent=Dca58179.1
scaffold85	Augus-PASA	exon	59346	59420	.	+	.	ID=Dca58179.1.exon6;Parent=Dca58179.1
scaffold85	Augus-PASA	exon	59819	59889	.	+	.	ID=Dca58179.1.exon7;Parent=Dca58179.1
scaffold85	Augus-PASA	exon	60001	60083	.	+	.	ID=Dca58179.1.exon8;Parent=Dca58179.1
scaffold85	Augus-PASA	exon	60242	60306	.	+	.	ID=Dca58179.1.exon9;Parent=Dca58179.1
scaffold85	Augus-PASA	exon	60409	60483	.	+	.	ID=Dca58179.1.exon10;Parent=Dca58179.1
scaffold85	Augus-PASA	exon	60675	60794	.	+	.	ID=Dca58179.1.exon11;Parent=Dca58179.1