Dca58228.1
Annotation
- 2-exons
- f-1
- sp|A5AEN5_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_011340#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Os08t0125300-01 Integrase, catalytic core domain containing protein.
- Repeat List (scaffold8504)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca58228.1 |
1 |
289 |
311 |
55.62 |
289 |
60 |
3e-101
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5AEN5_VITVI |
1027 |
1315 |
1316 |
21.96 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca58228.1 |
1 |
271 |
311 |
32.15 |
271 |
37 |
3e-44
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
1135 |
1405 |
1428 |
18.97 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold8504 |
Augustus |
mRNA |
699 |
2038 |
. |
- |
. |
ID=Dca58228.1;Parent=Dca58228 |
| scaffold8504 |
Augustus |
exon |
699 |
773 |
. |
- |
. |
ID=Dca58228.1.exon1;Parent=Dca58228.1 |
| scaffold8504 |
Augustus |
exon |
1178 |
2038 |
. |
- |
. |
ID=Dca58228.1.exon2;Parent=Dca58228.1 |
