Carnation DB

Dca5823.1

Annotation

6-exons
f-1
sp|A5AWV0_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_018163#GO:0005622;GO:0008234;GO:0008270;GO:0006508#2F1P1C
Repeat List (scaffold1225)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5823.1	1	155	557	12.02	155	43	1e-30
Target_name	Start	End	Length	Cov(%)
sp\|A5AWV0_VITVI	485	641	1482	10.59

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5823.1	326	392	557	6.1	67	51	6e-13
Target_name	Start	End	Length	Cov(%)
Os08t0344800-00	134	200	201	33.33

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1225	Augustus	mRNA	5708	14042	.	+	.	ID=Dca5823.1;Parent=Dca5823
scaffold1225	Augustus	exon	5708	6182	.	+	.	ID=Dca5823.1.exon1;Parent=Dca5823.1
scaffold1225	Augustus	exon	9095	9169	.	+	.	ID=Dca5823.1.exon2;Parent=Dca5823.1
scaffold1225	Augustus	exon	9356	9580	.	+	.	ID=Dca5823.1.exon3;Parent=Dca5823.1
scaffold1225	Augustus	exon	10901	11097	.	+	.	ID=Dca5823.1.exon4;Parent=Dca5823.1
scaffold1225	Augustus	exon	11412	11604	.	+	.	ID=Dca5823.1.exon5;Parent=Dca5823.1
scaffold1225	Augustus	exon	13534	14042	.	+	.	ID=Dca5823.1.exon6;Parent=Dca5823.1