Dca58276.1
Annotation
- 4-exons
- f-1
- sp|A5B1E1_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_012059#GO:0003676;GO:0015074#1F1P0C
- Os08t0125300-01 Integrase, catalytic core domain containing protein.
- Repeat List (scaffold8523)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca58276.1 |
12 |
812 |
822 |
36.73 |
801 |
34 |
4e-129
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5B1E1_VITVI |
8 |
839 |
1128 |
73.75 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca58276.1 |
348 |
812 |
822 |
21.28 |
465 |
35 |
2e-81
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
653 |
1139 |
1428 |
34.1 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold8523 |
Augustus |
mRNA |
4410 |
8061 |
. |
+ |
. |
ID=Dca58276.1;Parent=Dca58276 |
| scaffold8523 |
Augustus |
exon |
4410 |
5274 |
. |
+ |
. |
ID=Dca58276.1.exon1;Parent=Dca58276.1 |
| scaffold8523 |
Augustus |
exon |
5403 |
5579 |
. |
+ |
. |
ID=Dca58276.1.exon2;Parent=Dca58276.1 |
| scaffold8523 |
Augustus |
exon |
6519 |
7070 |
. |
+ |
. |
ID=Dca58276.1.exon3;Parent=Dca58276.1 |
| scaffold8523 |
Augustus |
exon |
7187 |
8061 |
. |
+ |
. |
ID=Dca58276.1.exon4;Parent=Dca58276.1 |
