Carnation DB

Dca5834.1

Annotation

5-exons
f-1
sp|D7T778_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_05s0020g04600#unknown#0F0P0C
AT5G43750.1 | Symbols: NDH18 | NAD(P)H dehydrogenase 18 | chr5:17580100-17581145 REVERSE LENGTH=212
Repeat List (scaffold1225)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5834.1	75	236	236	45.33	162	67	4e-65
Target_name	Start	End	Length	Cov(%)
sp\|D7T778_VITVI	57	218	218	74.31

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5834.1	57	236	236	45.76	180	60	2e-56
Target_name	Start	End	Length	Cov(%)
Os01t0929100-02	51	231	234	77.35

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1225	Augus-PASA	mRNA	78373	79715	.	-	.	ID=Dca5834.1;Parent=Dca5834
scaffold1225	Augus-PASA	exon	78373	78603	.	-	.	ID=Dca5834.1.exon1;Parent=Dca5834.1
scaffold1225	Augus-PASA	exon	78698	78756	.	-	.	ID=Dca5834.1.exon2;Parent=Dca5834.1
scaffold1225	Augus-PASA	exon	78840	78902	.	-	.	ID=Dca5834.1.exon3;Parent=Dca5834.1
scaffold1225	Augus-PASA	exon	79000	79060	.	-	.	ID=Dca5834.1.exon4;Parent=Dca5834.1
scaffold1225	Augus-PASA	exon	79419	79715	.	-	.	ID=Dca5834.1.exon5;Parent=Dca5834.1