Dca58434.1
Annotation
- 2-exons
- f-1
- sp|O81506_ARATH#Putative retrotransposon protein#Arabidopsis thaliana (Mouse-ear cress)#Name=T7M24.7#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold8580)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca58434.1 |
288 |
402 |
406 |
15.76 |
115 |
56 |
3e-33
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|O81506_ARATH |
848 |
962 |
964 |
11.92 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca58434.1 |
289 |
385 |
406 |
7.63 |
97 |
32 |
4e-07
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
1311 |
1405 |
1428 |
6.65 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold8580 |
Augustus |
mRNA |
8521 |
11554 |
. |
- |
. |
ID=Dca58434.1;Parent=Dca58434 |
| scaffold8580 |
Augustus |
exon |
8521 |
8879 |
. |
- |
. |
ID=Dca58434.1.exon1;Parent=Dca58434.1 |
| scaffold8580 |
Augustus |
exon |
10693 |
11554 |
. |
- |
. |
ID=Dca58434.1.exon2;Parent=Dca58434.1 |
