Carnation DB

Dca58441.1

Annotation

6-exons
f-1
sp|B9H9H9_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_801798#unknown#0F0P0C
Repeat List (scaffold8583)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca58441.1	15	300	300	79.66	286	84	1e-140
Target_name	Start	End	Length	Cov(%)
sp\|B9H9H9_POPTR	5	290	290	98.62

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca58441.1	1	300	300	75.66	300	76	5e-128
Target_name	Start	End	Length	Cov(%)
AT2G41350.2	1	298	299	99.66

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold8583	Augus-PASA	mRNA	17744	19476	.	+	.	ID=Dca58441.1;Parent=Dca58441
scaffold8583	Augus-PASA	exon	17744	18008	.	+	.	ID=Dca58441.1.exon1;Parent=Dca58441.1
scaffold8583	Augus-PASA	exon	18305	18437	.	+	.	ID=Dca58441.1.exon2;Parent=Dca58441.1
scaffold8583	Augus-PASA	exon	18539	18673	.	+	.	ID=Dca58441.1.exon3;Parent=Dca58441.1
scaffold8583	Augus-PASA	exon	18832	18955	.	+	.	ID=Dca58441.1.exon4;Parent=Dca58441.1
scaffold8583	Augus-PASA	exon	19135	19272	.	+	.	ID=Dca58441.1.exon5;Parent=Dca58441.1
scaffold8583	Augus-PASA	exon	19369	19476	.	+	.	ID=Dca58441.1.exon6;Parent=Dca58441.1