Carnation DB

Dca58518.1

Annotation

5-exons
f-1
sp|D7TSQ6_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_14s0006g01370#unknown#0F0P0C
Os12t0190000-01 Similar to VTC2.
Repeat List (scaffold86)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca58518.1	8	416	426	66.9	409	67	8e-164
Target_name	Start	End	Length	Cov(%)
sp\|D7TSQ6_VITVI	2	427	433	98.38

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca58518.1	4	390	426	62.67	387	65	1e-151
Target_name	Start	End	Length	Cov(%)
Os12t0190000-01	1	404	439	92.02

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold86	Augus-PASA	mRNA	179929	182805	.	-	.	ID=Dca58518.1;Parent=Dca58518
scaffold86	Augus-PASA	exon	179929	180261	.	-	.	ID=Dca58518.1.exon1;Parent=Dca58518.1
scaffold86	Augus-PASA	exon	180704	180961	.	-	.	ID=Dca58518.1.exon2;Parent=Dca58518.1
scaffold86	Augus-PASA	exon	181072	181257	.	-	.	ID=Dca58518.1.exon3;Parent=Dca58518.1
scaffold86	Augustus	exon	181360	181790	.	-	.	ID=Dca58518.1.exon4;Parent=Dca58518.1
scaffold86	Augustus	exon	182733	182805	.	-	.	ID=Dca58518.1.exon5;Parent=Dca58518.1