Carnation DB

Dca58700.1

Annotation

18-exons
f-1
sp|B9HQU4_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_821038#GO:0046872;GO:0008081#2F0P0C
AT5G40270.1 | Symbols: | HD domain-containing metal-dependent phosphohydrolase family protein | chr5:16093394-16097093 REVERSE LENGTH=473
Repeat List (scaffold864)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca58700.1	1	459	475	65.26	459	67	0
Target_name	Start	End	Length	Cov(%)
sp\|B9HQU4_POPTR	1	466	477	97.69

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca58700.1	24	459	475	61.47	436	67	2e-178
Target_name	Start	End	Length	Cov(%)
AT5G40270.1	27	461	473	91.96

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold864	Augus-PASA	mRNA	160896	167143	.	+	.	ID=Dca58700.1;Parent=Dca58700
scaffold864	Augus-PASA	exon	160896	161012	.	+	.	ID=Dca58700.1.exon1;Parent=Dca58700.1
scaffold864	Augus-PASA	exon	163561	163598	.	+	.	ID=Dca58700.1.exon2;Parent=Dca58700.1
scaffold864	Augus-PASA	exon	163700	163722	.	+	.	ID=Dca58700.1.exon3;Parent=Dca58700.1
scaffold864	Augus-PASA	exon	164153	164259	.	+	.	ID=Dca58700.1.exon4;Parent=Dca58700.1
scaffold864	Augus-PASA	exon	164337	164388	.	+	.	ID=Dca58700.1.exon5;Parent=Dca58700.1
scaffold864	Augus-PASA	exon	164485	164572	.	+	.	ID=Dca58700.1.exon6;Parent=Dca58700.1
scaffold864	Augus-PASA	exon	164824	164914	.	+	.	ID=Dca58700.1.exon7;Parent=Dca58700.1
scaffold864	Augus-PASA	exon	165070	165108	.	+	.	ID=Dca58700.1.exon8;Parent=Dca58700.1
scaffold864	Augus-PASA	exon	165226	165293	.	+	.	ID=Dca58700.1.exon9;Parent=Dca58700.1
scaffold864	Augus-PASA	exon	165414	165532	.	+	.	ID=Dca58700.1.exon10;Parent=Dca58700.1
scaffold864	Augus-PASA	exon	165615	165688	.	+	.	ID=Dca58700.1.exon11;Parent=Dca58700.1
scaffold864	Augus-PASA	exon	165826	165918	.	+	.	ID=Dca58700.1.exon12;Parent=Dca58700.1
scaffold864	Augus-PASA	exon	166010	166111	.	+	.	ID=Dca58700.1.exon13;Parent=Dca58700.1
scaffold864	Augus-PASA	exon	166195	166275	.	+	.	ID=Dca58700.1.exon14;Parent=Dca58700.1
scaffold864	Augus-PASA	exon	166350	166441	.	+	.	ID=Dca58700.1.exon15;Parent=Dca58700.1
scaffold864	Augus-PASA	exon	166536	166551	.	+	.	ID=Dca58700.1.exon16;Parent=Dca58700.1
scaffold864	Augus-PASA	exon	166820	166930	.	+	.	ID=Dca58700.1.exon17;Parent=Dca58700.1
scaffold864	Augus-PASA	exon	167027	167143	.	+	.	ID=Dca58700.1.exon18;Parent=Dca58700.1