Carnation DB

Dca5880.1

Annotation

7-exons
f-1
sp|E0CT36_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_19s0014g04960#GO:0005524;GO:0004674#2F0P0C
sp|B9S9Z6_RICCO#Serine/threonine-specific protein kinase, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0180410#GO:0005524;GO:0004709#2F0P0C
Repeat List (scaffold1228)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5880.1	1	422	427	73.77	422	74	0
Target_name	Start	End	Length	Cov(%)
sp\|E0CT36_VITVI	1	423	430	98.37

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5880.1	1	390	427	66.97	390	74	1e-170
Target_name	Start	End	Length	Cov(%)
AT5G54590.2	1	387	440	87.95

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1228	Augustus	mRNA	57511	59465	.	+	.	ID=Dca5880.1;Parent=Dca5880
scaffold1228	Augustus	exon	57511	57836	.	+	.	ID=Dca5880.1.exon1;Parent=Dca5880.1
scaffold1228	Augustus	exon	57982	58135	.	+	.	ID=Dca5880.1.exon2;Parent=Dca5880.1
scaffold1228	Augustus	exon	58233	58359	.	+	.	ID=Dca5880.1.exon3;Parent=Dca5880.1
scaffold1228	Augustus	exon	58459	58544	.	+	.	ID=Dca5880.1.exon4;Parent=Dca5880.1
scaffold1228	Augustus	exon	58649	58720	.	+	.	ID=Dca5880.1.exon5;Parent=Dca5880.1
scaffold1228	Augustus	exon	58840	59043	.	+	.	ID=Dca5880.1.exon6;Parent=Dca5880.1
scaffold1228	Augustus	exon	59151	59465	.	+	.	ID=Dca5880.1.exon7;Parent=Dca5880.1