Dca58868.1
Annotation
- 3-exons
- f-1
- sp|A9NVS9_PICSI#Putative uncharacterized protein#Picea sitchensis (Sitka spruce) (Pinus sitchensis)#unknown#GO:0016020;GO:0005484;GO:0006886;GO:0016192#1F2P1C
- Os01t0254900-01 Similar to Syntaxin 22 (AtSYP22) (AtVAM3).
- Repeat List (scaffold87)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca58868.1 |
1 |
139 |
179 |
33.51 |
139 |
41 |
4e-17
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A9NVS9_PICSI |
1 |
137 |
273 |
50.18 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca58868.1 |
1 |
127 |
179 |
29.6 |
127 |
42 |
1e-15
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G46860.1 |
1 |
124 |
268 |
46.26 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold87 |
Augustus |
mRNA |
195985 |
196812 |
. |
- |
. |
ID=Dca58868.1;Parent=Dca58868 |
| scaffold87 |
Augustus |
exon |
195985 |
196236 |
. |
- |
. |
ID=Dca58868.1.exon1;Parent=Dca58868.1 |
| scaffold87 |
Augustus |
exon |
196362 |
196467 |
. |
- |
. |
ID=Dca58868.1.exon2;Parent=Dca58868.1 |
| scaffold87 |
Augustus |
exon |
196631 |
196812 |
. |
- |
. |
ID=Dca58868.1.exon3;Parent=Dca58868.1 |
