Carnation DB

Dca58915.1

Annotation

6-exons
f-1
sp|B9RNF2_RICCO#Histidine kinase 1 plant, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1347240#GO:0016020;GO:0005524;GO:0000156;GO:0000155;GO:0018106;GO:0006355#3F2P1C
Repeat List (scaffold871)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca58915.1	21	664	668	45.95	644	38	5e-130
Target_name	Start	End	Length	Cov(%)
sp\|B9RNF2_RICCO	330	1132	1138	70.56

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca58915.1	17	655	668	40.11	639	34	9e-114
Target_name	Start	End	Length	Cov(%)
AT2G47430.1	318	1107	1122	70.4

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold871	Augustus	mRNA	8014	11072	.	+	.	ID=Dca58915.1;Parent=Dca58915
scaffold871	Augustus	exon	8014	8070	.	+	.	ID=Dca58915.1.exon1;Parent=Dca58915.1
scaffold871	Augustus	exon	8662	8986	.	+	.	ID=Dca58915.1.exon2;Parent=Dca58915.1
scaffold871	Augustus	exon	9192	9772	.	+	.	ID=Dca58915.1.exon3;Parent=Dca58915.1
scaffold871	Augustus	exon	9855	10453	.	+	.	ID=Dca58915.1.exon4;Parent=Dca58915.1
scaffold871	Augustus	exon	10544	10787	.	+	.	ID=Dca58915.1.exon5;Parent=Dca58915.1
scaffold871	Augustus	exon	10872	11072	.	+	.	ID=Dca58915.1.exon6;Parent=Dca58915.1