Carnation DB

Dca58959.1

Annotation

7-exons
f-1
sp|F8RWT2_HEVBR#Protein binding/ubiquitin-protein ligase 2#Hevea brasiliensis (Para rubber tree) (Siphonia brasiliensis)#unknown#GO:0016881;GO:0005524#2F0P0C
Repeat List (scaffold8727)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca58959.1	1	142	142	97.88	142	98	3e-77
Target_name	Start	End	Length	Cov(%)
sp\|F8RWT2_HEVBR	1	142	153	92.81

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca58959.1	1	142	142	95.77	142	96	9e-77
Target_name	Start	End	Length	Cov(%)
Os01t0673600-01	1	142	154	92.2

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold8727	Augustus	mRNA	9703	12825	.	+	.	ID=Dca58959.1;Parent=Dca58959
scaffold8727	Augustus	exon	9703	9738	.	+	.	ID=Dca58959.1.exon1;Parent=Dca58959.1
scaffold8727	Augustus	exon	9900	9927	.	+	.	ID=Dca58959.1.exon2;Parent=Dca58959.1
scaffold8727	Augustus	exon	10473	10559	.	+	.	ID=Dca58959.1.exon3;Parent=Dca58959.1
scaffold8727	Augustus	exon	11541	11599	.	+	.	ID=Dca58959.1.exon4;Parent=Dca58959.1
scaffold8727	Augustus	exon	12197	12238	.	+	.	ID=Dca58959.1.exon5;Parent=Dca58959.1
scaffold8727	Augustus	exon	12330	12403	.	+	.	ID=Dca58959.1.exon6;Parent=Dca58959.1
scaffold8727	Augustus	exon	12723	12825	.	+	.	ID=Dca58959.1.exon7;Parent=Dca58959.1