Dca59064.1
Annotation
- 2-exons
- f-1
- sp|Q7G508_ORYSJ#Retrotransposon protein, putative, Ty1-copia subclass#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os10g08990#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold8767)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca59064.1 |
2 |
542 |
575 |
53.56 |
541 |
54 |
2e-171
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q7G508_ORYSJ |
40 |
560 |
655 |
79.54 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca59064.1 |
2 |
214 |
575 |
16.17 |
213 |
44 |
3e-46
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
549 |
764 |
1428 |
15.12 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold8767 |
Augustus |
mRNA |
10158 |
12087 |
. |
- |
. |
ID=Dca59064.1;Parent=Dca59064 |
| scaffold8767 |
Augustus |
exon |
10158 |
11268 |
. |
- |
. |
ID=Dca59064.1.exon1;Parent=Dca59064.1 |
| scaffold8767 |
Augustus |
exon |
11471 |
12087 |
. |
- |
. |
ID=Dca59064.1.exon2;Parent=Dca59064.1 |
