Carnation DB

Dca5911.1

Annotation

6-exons
f-1
sp|A8TLW5_CAPAN#BHLH transcription factor Upa20#Capsicum annuum (Bell pepper)#unknown#unknown#0F0P0C
Repeat List (scaffold123)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5911.1	6	222	222	54.05	217	56	3e-49
Target_name	Start	End	Length	Cov(%)
sp\|A8TLW5_CAPAN	148	340	340	56.76

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5911.1	3	222	222	48.19	220	49	7e-43
Target_name	Start	End	Length	Cov(%)
Os08t0536800-01	122	309	310	60.64

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold123	Augus-PASA	mRNA	34311	37622	.	+	.	ID=Dca5911.1;Parent=Dca5911
scaffold123	Augus-PASA	exon	34311	34424	.	+	.	ID=Dca5911.1.exon1;Parent=Dca5911.1
scaffold123	Augus-PASA	exon	34559	34624	.	+	.	ID=Dca5911.1.exon2;Parent=Dca5911.1
scaffold123	Augus-PASA	exon	35005	35073	.	+	.	ID=Dca5911.1.exon3;Parent=Dca5911.1
scaffold123	Augus-PASA	exon	35315	35407	.	+	.	ID=Dca5911.1.exon4;Parent=Dca5911.1
scaffold123	Augus-PASA	exon	35533	35757	.	+	.	ID=Dca5911.1.exon5;Parent=Dca5911.1
scaffold123	Augus-PASA	exon	37521	37622	.	+	.	ID=Dca5911.1.exon6;Parent=Dca5911.1