Carnation DB

Dca59149.1

Annotation

9-exons
f-1
sp|D7UDF1_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_18s0122g00680#GO:0019898;GO:0009654;GO:0005509;GO:0015979#1F1P2C
AT1G76450.1 | Symbols: | Photosystem II reaction center PsbP family protein | chr1:28684618-28686109 FORWARD LENGTH=247
Repeat List (scaffold88)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca59149.1	39	262	263	51.71	224	61	6e-76
Target_name	Start	End	Length	Cov(%)
sp\|D7UDF1_VITVI	34	252	253	86.56

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca59149.1	44	262	263	49.42	219	60	1e-70
Target_name	Start	End	Length	Cov(%)
AT1G76450.1	36	246	247	85.42

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold88	Augus-PASA	mRNA	9800	11642	.	+	.	ID=Dca59149.1;Parent=Dca59149
scaffold88	Augus-PASA	exon	9800	9893	.	+	.	ID=Dca59149.1.exon1;Parent=Dca59149.1
scaffold88	Augus-PASA	exon	9997	10191	.	+	.	ID=Dca59149.1.exon2;Parent=Dca59149.1
scaffold88	Augus-PASA	exon	10411	10476	.	+	.	ID=Dca59149.1.exon3;Parent=Dca59149.1
scaffold88	Augus-PASA	exon	10607	10693	.	+	.	ID=Dca59149.1.exon4;Parent=Dca59149.1
scaffold88	Augus-PASA	exon	10815	10897	.	+	.	ID=Dca59149.1.exon5;Parent=Dca59149.1
scaffold88	Augus-PASA	exon	10984	11059	.	+	.	ID=Dca59149.1.exon6;Parent=Dca59149.1
scaffold88	Augus-PASA	exon	11273	11391	.	+	.	ID=Dca59149.1.exon7;Parent=Dca59149.1
scaffold88	Augus-PASA	exon	11492	11536	.	+	.	ID=Dca59149.1.exon8;Parent=Dca59149.1
scaffold88	Augus-PASA	exon	11616	11642	.	+	.	ID=Dca59149.1.exon9;Parent=Dca59149.1