Carnation DB

Dca59194.1

Annotation

6-exons
f-1
sp|F6I5N1_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_11s0103g00660#GO:0008270#1F0P0C
Os04t0425100-01 Zinc finger, RING/FYVE/PHD-type domain containing protein.
Repeat List (scaffold880)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca59194.1	87	503	525	36.57	417	45	3e-89
Target_name	Start	End	Length	Cov(%)
sp\|F6I5N1_VITVI	62	485	508	83.46

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca59194.1	215	503	525	22.85	289	41	6e-52
Target_name	Start	End	Length	Cov(%)
Os04t0425100-01	148	431	438	64.84

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold880	Augustus	mRNA	24965	30458	.	+	.	ID=Dca59194.1;Parent=Dca59194
scaffold880	Augustus	exon	24965	26121	.	+	.	ID=Dca59194.1.exon1;Parent=Dca59194.1
scaffold880	Augustus	exon	27962	28022	.	+	.	ID=Dca59194.1.exon2;Parent=Dca59194.1
scaffold880	Augustus	exon	28153	28271	.	+	.	ID=Dca59194.1.exon3;Parent=Dca59194.1
scaffold880	Augustus	exon	29155	29245	.	+	.	ID=Dca59194.1.exon4;Parent=Dca59194.1
scaffold880	Augustus	exon	29831	29878	.	+	.	ID=Dca59194.1.exon5;Parent=Dca59194.1
scaffold880	Augustus	exon	30357	30458	.	+	.	ID=Dca59194.1.exon6;Parent=Dca59194.1