Dca59243.1
Annotation
- 2-exons
- f-1
- sp|Q2AA50_ASPOF#Retrotransposon gag protein#Asparagus officinalis (Garden asparagus)#ORFNames=19.t00014#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold8810)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca59243.1 |
3 |
485 |
485 |
59.38 |
483 |
56 |
8e-161
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q2AA50_ASPOF |
655 |
1164 |
1788 |
28.52 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca59243.1 |
178 |
484 |
485 |
21.23 |
307 |
31 |
7e-41
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0202300-03 |
10 |
331 |
591 |
54.48 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold8810 |
Augustus |
mRNA |
2902 |
4451 |
. |
- |
. |
ID=Dca59243.1;Parent=Dca59243 |
| scaffold8810 |
Augustus |
exon |
2902 |
3096 |
. |
- |
. |
ID=Dca59243.1.exon1;Parent=Dca59243.1 |
| scaffold8810 |
Augustus |
exon |
3189 |
4451 |
. |
- |
. |
ID=Dca59243.1.exon2;Parent=Dca59243.1 |
