Carnation DB

Dca59413.1

Annotation

5-exons
f-1
sp|F4NCH8_BETVU#Putative uncharacterized protein#Beta vulgaris subsp vulgaris#unknown#GO:0003723;GO:0003964;GO:0006278#2F1P0C
sp|Q8S6P1_ORYSJ#Putative reverse transcriptase#Oryza sativa subsp japonica (Rice)#Name=OSJNBa0073L01.7#GO:0003723;GO:0003964;GO:0008270;GO:0006278#3F1P0C
Repeat List (scaffold887)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca59413.1	79	243	587	14.48	165	43	1e-40
Target_name	Start	End	Length	Cov(%)
sp\|F4NCH8_BETVU	452	653	1365	14.79

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca59413.1	8	243	587	16.35	236	30	6e-28
Target_name	Start	End	Length	Cov(%)
Os06t0484800-00	242	559	857	37.1

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold887	Augustus	mRNA	113386	116648	.	-	.	ID=Dca59413.1;Parent=Dca59413
scaffold887	Augustus	exon	113386	114382	.	-	.	ID=Dca59413.1.exon1;Parent=Dca59413.1
scaffold887	Augustus	exon	114750	114801	.	-	.	ID=Dca59413.1.exon2;Parent=Dca59413.1
scaffold887	Augustus	exon	115634	115928	.	-	.	ID=Dca59413.1.exon3;Parent=Dca59413.1
scaffold887	Augustus	exon	116040	116218	.	-	.	ID=Dca59413.1.exon4;Parent=Dca59413.1
scaffold887	Augustus	exon	116408	116648	.	-	.	ID=Dca59413.1.exon5;Parent=Dca59413.1