Carnation DB

Dca5942.1

Annotation

7-exons
f-1
sp|B9T805_RICCO#Serine/threonine-protein kinase PBS1, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0446270#GO:0005524;GO:0004713#2F0P0C
Repeat List (scaffold1230)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5942.1	1	383	384	77.34	383	77	2e-167
Target_name	Start	End	Length	Cov(%)
sp\|B9T805_RICCO	1	364	365	99.72

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5942.1	1	381	384	75	381	75	2e-160
Target_name	Start	End	Length	Cov(%)
AT2G41970.1	1	362	365	99.17

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1230	Augustus	mRNA	48846	51597	.	-	.	ID=Dca5942.1;Parent=Dca5942
scaffold1230	Augustus	exon	48846	48971	.	-	.	ID=Dca5942.1.exon1;Parent=Dca5942.1
scaffold1230	Augustus	exon	49077	49163	.	-	.	ID=Dca5942.1.exon2;Parent=Dca5942.1
scaffold1230	Augustus	exon	49260	49486	.	-	.	ID=Dca5942.1.exon3;Parent=Dca5942.1
scaffold1230	Augustus	exon	50379	50627	.	-	.	ID=Dca5942.1.exon4;Parent=Dca5942.1
scaffold1230	Augustus	exon	50752	50878	.	-	.	ID=Dca5942.1.exon5;Parent=Dca5942.1
scaffold1230	Augustus	exon	50972	51228	.	-	.	ID=Dca5942.1.exon6;Parent=Dca5942.1
scaffold1230	Augustus	exon	51516	51597	.	-	.	ID=Dca5942.1.exon7;Parent=Dca5942.1