Dca59443.1
Annotation
- 2-exons
- f-1
- sp|D3IVU0_9POAL#Putative retrotransposon protein#Phyllostachys edulis#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold8886)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca59443.1 |
1 |
222 |
228 |
60.08 |
222 |
56 |
5e-76
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D3IVU0_9POAL |
648 |
893 |
896 |
27.45 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca59443.1 |
5 |
207 |
228 |
32.45 |
203 |
33 |
3e-25
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
1161 |
1378 |
1401 |
15.56 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold8886 |
Augustus |
mRNA |
3858 |
4617 |
. |
+ |
. |
ID=Dca59443.1;Parent=Dca59443 |
| scaffold8886 |
Augustus |
exon |
3858 |
4152 |
. |
+ |
. |
ID=Dca59443.1.exon1;Parent=Dca59443.1 |
| scaffold8886 |
Augustus |
exon |
4226 |
4617 |
. |
+ |
. |
ID=Dca59443.1.exon2;Parent=Dca59443.1 |
