Dca5963.1
Annotation
- 4-exons
- f-1
- sp|A5BAQ4_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_004685#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Os08t0125300-01 Integrase, catalytic core domain containing protein.
- Repeat List (scaffold1231)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca5963.1 |
114 |
331 |
576 |
14.4 |
218 |
32 |
3e-27
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5BAQ4_VITVI |
1 |
260 |
1196 |
21.73 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca5963.1 |
378 |
567 |
576 |
12.5 |
190 |
36 |
2e-26
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
494 |
691 |
1428 |
13.86 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1231 |
Augustus |
mRNA |
17981 |
20648 |
. |
- |
. |
ID=Dca5963.1;Parent=Dca5963 |
| scaffold1231 |
Augustus |
exon |
17981 |
18694 |
. |
- |
. |
ID=Dca5963.1.exon1;Parent=Dca5963.1 |
| scaffold1231 |
Augustus |
exon |
18970 |
19380 |
. |
- |
. |
ID=Dca5963.1.exon2;Parent=Dca5963.1 |
| scaffold1231 |
Augustus |
exon |
19456 |
19949 |
. |
- |
. |
ID=Dca5963.1.exon3;Parent=Dca5963.1 |
| scaffold1231 |
Augustus |
exon |
20537 |
20648 |
. |
- |
. |
ID=Dca5963.1.exon4;Parent=Dca5963.1 |
