Carnation DB

Dca59691.1

Annotation

6-exons
f-1
sp|A5AP17_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_033533#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
Os08t0202300-03 Reverse transcriptase domain containing protein.
Repeat List (scaffold897)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca59691.1	228	1081	1081	38.48	854	45	0
Target_name	Start	End	Length	Cov(%)
sp\|A5AP17_VITVI	877	1755	1918	45.82

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca59691.1	653	1058	1081	11.65	406	31	3e-45
Target_name	Start	End	Length	Cov(%)
Os08t0202300-03	167	550	591	64.97

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold897	Augustus	mRNA	92603	96827	.	+	.	ID=Dca59691.1;Parent=Dca59691
scaffold897	Augustus	exon	92603	92743	.	+	.	ID=Dca59691.1.exon1;Parent=Dca59691.1
scaffold897	Augustus	exon	92831	93118	.	+	.	ID=Dca59691.1.exon2;Parent=Dca59691.1
scaffold897	Augustus	exon	93263	93514	.	+	.	ID=Dca59691.1.exon3;Parent=Dca59691.1
scaffold897	Augustus	exon	93607	94664	.	+	.	ID=Dca59691.1.exon4;Parent=Dca59691.1
scaffold897	Augustus	exon	95239	95468	.	+	.	ID=Dca59691.1.exon5;Parent=Dca59691.1
scaffold897	Augustus	exon	95551	96827	.	+	.	ID=Dca59691.1.exon6;Parent=Dca59691.1