Dca5979.1
Annotation
- 4-exons
- f-1
- sp|B9I061_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_661061#unknown#0F0P0C
- AT5G54540.1 | Symbols: | Uncharacterised conserved protein (UCP012943) | chr5:22156604-22157857 FORWARD LENGTH=297
- Repeat List (scaffold12318)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca5979.1 |
1 |
317 |
318 |
37.42 |
317 |
36 |
1e-41
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9I061_POPTR |
1 |
325 |
326 |
99.69 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca5979.1 |
1 |
317 |
318 |
33.64 |
317 |
32 |
4e-28
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G54540.1 |
1 |
296 |
297 |
99.66 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold12318 |
Augus-PASA |
mRNA |
5157 |
8527 |
. |
- |
. |
ID=Dca5979.1;Parent=Dca5979 |
| scaffold12318 |
Augus-PASA |
exon |
5157 |
5485 |
. |
- |
. |
ID=Dca5979.1.exon1;Parent=Dca5979.1 |
| scaffold12318 |
Augus-PASA |
exon |
5593 |
5686 |
. |
- |
. |
ID=Dca5979.1.exon2;Parent=Dca5979.1 |
| scaffold12318 |
Augus-PASA |
exon |
6932 |
7079 |
. |
- |
. |
ID=Dca5979.1.exon3;Parent=Dca5979.1 |
| scaffold12318 |
Augus-PASA |
exon |
8142 |
8527 |
. |
- |
. |
ID=Dca5979.1.exon4;Parent=Dca5979.1 |
