Dca5981.1
Annotation
- 3-exons
- f-1
- sp|B9ID16_POPTR#ABC transporter family protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_575754#GO:0016021;GO:0005524;GO:0042626#2F0P1C
- Repeat List (scaffold12319)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca5981.1 |
30 |
204 |
222 |
44.59 |
175 |
54 |
2e-43
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9ID16_POPTR |
31 |
201 |
562 |
30.42 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca5981.1 |
65 |
203 |
222 |
34.68 |
139 |
56 |
5e-38
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G25450.1 |
62 |
195 |
714 |
18.76 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold12319 |
Augustus |
mRNA |
1840 |
4820 |
. |
- |
. |
ID=Dca5981.1;Parent=Dca5981 |
| scaffold12319 |
Augustus |
exon |
1840 |
1905 |
. |
- |
. |
ID=Dca5981.1.exon1;Parent=Dca5981.1 |
| scaffold12319 |
Augustus |
exon |
2605 |
2792 |
. |
- |
. |
ID=Dca5981.1.exon2;Parent=Dca5981.1 |
| scaffold12319 |
Augustus |
exon |
4406 |
4820 |
. |
- |
. |
ID=Dca5981.1.exon3;Parent=Dca5981.1 |
