Carnation DB

Dca5982.1

Annotation

5-exons
f-1
sp|B9GNK6_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_1071903#GO:0016020#0F0P1C
AT1G10090.1 | Symbols: | Early-responsive to dehydration stress protein (ERD4) | chr1:3290572-3295271 REVERSE LENGTH=762
Repeat List (scaffold1232)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5982.1	1	389	389	55.26	389	55	3e-114
Target_name	Start	End	Length	Cov(%)
sp\|B9GNK6_POPTR	1	393	736	53.39

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5982.1	1	389	389	50.38	389	49	4e-103
Target_name	Start	End	Length	Cov(%)
AT1G10090.1	1	396	762	51.96

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1232	Augustus	mRNA	6849	14168	.	+	.	ID=Dca5982.1;Parent=Dca5982
scaffold1232	Augustus	exon	6849	7132	.	+	.	ID=Dca5982.1.exon1;Parent=Dca5982.1
scaffold1232	Augustus	exon	9145	9291	.	+	.	ID=Dca5982.1.exon2;Parent=Dca5982.1
scaffold1232	Augustus	exon	10223	10481	.	+	.	ID=Dca5982.1.exon3;Parent=Dca5982.1
scaffold1232	Augustus	exon	10706	10882	.	+	.	ID=Dca5982.1.exon4;Parent=Dca5982.1
scaffold1232	Augustus	exon	13866	14168	.	+	.	ID=Dca5982.1.exon5;Parent=Dca5982.1