Carnation DB

Dca59986.1

Annotation

5-exons
f-1
sp|F2D2B2_HORVD#Predicted protein#Hordeum vulgare var distichum (Two-rowed barley)#unknown#GO:0016021;GO:0005743;GO:0005488;GO:0055085#1F1P2C
sp|B9SZ46_RICCO#Protein brittle-1, chloroplast, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0213230#GO:0016021;GO:0005743;GO:0005488;GO:0055085#1F1P2C
Repeat List (scaffold9033)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca59986.1	3	321	415	54.93	319	70	3e-130
Target_name	Start	End	Length	Cov(%)
sp\|F2D2B2_HORVD	72	396	418	77.75

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca59986.1	32	321	415	53.49	290	77	6e-126
Target_name	Start	End	Length	Cov(%)
Os03t0191100-03	108	399	422	69.19

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold9033	Augustus	mRNA	6176	9147	.	-	.	ID=Dca59986.1;Parent=Dca59986
scaffold9033	Augustus	exon	6176	6230	.	-	.	ID=Dca59986.1.exon1;Parent=Dca59986.1
scaffold9033	Augustus	exon	6399	6628	.	-	.	ID=Dca59986.1.exon2;Parent=Dca59986.1
scaffold9033	Augustus	exon	6721	7185	.	-	.	ID=Dca59986.1.exon3;Parent=Dca59986.1
scaffold9033	Augustus	exon	7785	8088	.	-	.	ID=Dca59986.1.exon4;Parent=Dca59986.1
scaffold9033	Augustus	exon	8954	9147	.	-	.	ID=Dca59986.1.exon5;Parent=Dca59986.1