Dca60401.1
Annotation
- 3-exons
- f-1
- sp|B9HW02_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_1093028#GO:0008270#1F0P0C
- Os11t0150450-01 Similar to Zinc finger, C3HC4 type family protein, expressed.
- Repeat List (scaffold9195)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca60401.1 |
1 |
206 |
213 |
52.58 |
206 |
53 |
2e-55
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9HW02_POPTR |
2 |
211 |
227 |
92.51 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca60401.1 |
1 |
208 |
213 |
42.72 |
208 |
39 |
8e-32
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0150450-01 |
1 |
234 |
254 |
92.12 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold9195 |
Augustus |
mRNA |
5673 |
8237 |
. |
+ |
. |
ID=Dca60401.1;Parent=Dca60401 |
| scaffold9195 |
Augustus |
exon |
5673 |
5837 |
. |
+ |
. |
ID=Dca60401.1.exon1;Parent=Dca60401.1 |
| scaffold9195 |
Augustus |
exon |
6825 |
6922 |
. |
+ |
. |
ID=Dca60401.1.exon2;Parent=Dca60401.1 |
| scaffold9195 |
Augustus |
exon |
7859 |
8237 |
. |
+ |
. |
ID=Dca60401.1.exon3;Parent=Dca60401.1 |
