Carnation DB

Dca60411.1

Annotation

4-exons
f-1
sp|B9SC65_RICCO#Splicing factor, arginine/serine-rich, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1408100#unknown#0F0P0C
Repeat List (scaffold92)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca60411.1	1	128	131	86.25	128	88	7e-52
Target_name	Start	End	Length	Cov(%)
sp\|B9SC65_RICCO	1	129	553	23.32

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca60411.1	1	128	131	82.44	128	85	4e-51
Target_name	Start	End	Length	Cov(%)
AT4G36980.4	1	128	556	23.02

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold92	Augus-PASA	mRNA	34096	37361	.	+	.	ID=Dca60411.1;Parent=Dca60411
scaffold92	Augus-PASA	exon	34096	34292	.	+	.	ID=Dca60411.1.exon1;Parent=Dca60411.1
scaffold92	Augus-PASA	exon	36630	36668	.	+	.	ID=Dca60411.1.exon2;Parent=Dca60411.1
scaffold92	Augus-PASA	exon	36783	36935	.	+	.	ID=Dca60411.1.exon3;Parent=Dca60411.1
scaffold92	Augustus	exon	37355	37361	.	+	.	ID=Dca60411.1.exon4;Parent=Dca60411.1
scaffold92	Augus-PASA	mRNA	34096	40436	.	+	.	ID=Dca60411.2;Parent=Dca60411
scaffold92	Augus-PASA	exon	34096	34292	.	+	.	ID=Dca60411.2.exon1;Parent=Dca60411.2
scaffold92	Augus-PASA	exon	36630	36668	.	+	.	ID=Dca60411.2.exon2;Parent=Dca60411.2
scaffold92	Augustus	exon	36783	36931	.	+	.	ID=Dca60411.2.exon3;Parent=Dca60411.2
scaffold92	Augus-PASA	exon	37355	37430	.	+	.	ID=Dca60411.2.exon4;Parent=Dca60411.2
scaffold92	Augus-PASA	exon	37955	38240	.	+	.	ID=Dca60411.2.exon5;Parent=Dca60411.2
scaffold92	Augustus	exon	38333	38442	.	+	.	ID=Dca60411.2.exon6;Parent=Dca60411.2
scaffold92	Augus-PASA	exon	38519	38566	.	+	.	ID=Dca60411.2.exon7;Parent=Dca60411.2
scaffold92	Augustus	exon	38654	38848	.	+	.	ID=Dca60411.2.exon8;Parent=Dca60411.2
scaffold92	Augustus	exon	39098	39199	.	+	.	ID=Dca60411.2.exon9;Parent=Dca60411.2
scaffold92	Augustus	exon	39408	39532	.	+	.	ID=Dca60411.2.exon10;Parent=Dca60411.2
scaffold92	Augustus	exon	39674	39812	.	+	.	ID=Dca60411.2.exon11;Parent=Dca60411.2
scaffold92	Augustus	exon	40121	40311	.	+	.	ID=Dca60411.2.exon12;Parent=Dca60411.2
scaffold92	Augustus	exon	40408	40436	.	+	.	ID=Dca60411.2.exon13;Parent=Dca60411.2