Carnation DB

Dca60476.1

Annotation

5-exons
f-1
sp|F6HQX5_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_08s0040g02740#unknown#0F0P0C
AT3G55140.1 | Symbols: | Pectin lyase-like superfamily protein | chr3:20438819-20440225 FORWARD LENGTH=331
Repeat List (scaffold921)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca60476.1	5	328	336	76.19	324	80	2e-154
Target_name	Start	End	Length	Cov(%)
sp\|F6HQX5_VITVI	48	369	373	86.32

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca60476.1	4	327	336	70.23	324	73	2e-144
Target_name	Start	End	Length	Cov(%)
AT3G55140.1	3	326	331	97.88

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold921	Augus-PASA	mRNA	80593	82528	.	+	.	ID=Dca60476.1;Parent=Dca60476
scaffold921	Augus-PASA	exon	80593	80722	.	+	.	ID=Dca60476.1.exon1;Parent=Dca60476.1
scaffold921	Augus-PASA	exon	81370	81721	.	+	.	ID=Dca60476.1.exon2;Parent=Dca60476.1
scaffold921	Augus-PASA	exon	81816	82026	.	+	.	ID=Dca60476.1.exon3;Parent=Dca60476.1
scaffold921	Augus-PASA	exon	82134	82202	.	+	.	ID=Dca60476.1.exon4;Parent=Dca60476.1
scaffold921	Augus-PASA	exon	82280	82528	.	+	.	ID=Dca60476.1.exon5;Parent=Dca60476.1