Carnation DB

Dca60524.1

Annotation

9-exons
f-1
sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
sp|Q9FZN9_ARATH#Retroelement pol polyprotein-like#Arabidopsis thaliana (Mouse-ear cress)#unknown#GO:0003723;GO:0003964;GO:0015074;GO:0006278#2F2P0C
Repeat List (scaffold9236)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca60524.1	5	538	1444	19.66	534	48	2e-116
Target_name	Start	End	Length	Cov(%)
sp\|E2DN01_BETVU	292	837	1717	31.79

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca60524.1	743	795	1444	2.63	53	72	7e-18
Target_name	Start	End	Length	Cov(%)
ATMG00750.1	35	87	119	44.53

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold9236	Augustus	mRNA	3208	10187	.	-	.	ID=Dca60524.1;Parent=Dca60524
scaffold9236	Augustus	exon	3208	3594	.	-	.	ID=Dca60524.1.exon1;Parent=Dca60524.1
scaffold9236	Augustus	exon	3715	4707	.	-	.	ID=Dca60524.1.exon2;Parent=Dca60524.1
scaffold9236	Augustus	exon	5386	5461	.	-	.	ID=Dca60524.1.exon3;Parent=Dca60524.1
scaffold9236	Augustus	exon	5715	6097	.	-	.	ID=Dca60524.1.exon4;Parent=Dca60524.1
scaffold9236	Augustus	exon	6242	6911	.	-	.	ID=Dca60524.1.exon5;Parent=Dca60524.1
scaffold9236	Augustus	exon	7033	7260	.	-	.	ID=Dca60524.1.exon6;Parent=Dca60524.1
scaffold9236	Augustus	exon	8288	8350	.	-	.	ID=Dca60524.1.exon7;Parent=Dca60524.1
scaffold9236	Augustus	exon	8516	8709	.	-	.	ID=Dca60524.1.exon8;Parent=Dca60524.1
scaffold9236	Augustus	exon	8847	10187	.	-	.	ID=Dca60524.1.exon9;Parent=Dca60524.1