Dca60548.1
Annotation
- 2-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold925)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca60548.1 |
1563 |
1711 |
1712 |
2.8 |
149 |
33 |
2e-14
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
527 |
672 |
1501 |
9.72 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca60548.1 |
1551 |
1711 |
1712 |
2.92 |
161 |
31 |
1e-09
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
546 |
698 |
1539 |
9.94 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold925 |
Augustus |
mRNA |
111945 |
118048 |
. |
+ |
. |
ID=Dca60548.1;Parent=Dca60548 |
| scaffold925 |
Augustus |
exon |
111945 |
116485 |
. |
+ |
. |
ID=Dca60548.1.exon1;Parent=Dca60548.1 |
| scaffold925 |
Augustus |
exon |
117451 |
118048 |
. |
+ |
. |
ID=Dca60548.1.exon2;Parent=Dca60548.1 |
