Carnation DB

Dca60583.1

Annotation

5-exons
f-1
sp|B9HVL6_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_822022#GO:0003677#1F0P0C
Repeat List (scaffold9264)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca60583.1	17	86	221	15.83	70	49	2e-09
Target_name	Start	End	Length	Cov(%)
sp\|B9HVL6_POPTR	275	342	552	12.31

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca60583.1	33	87	221	12.66	55	51	2e-06
Target_name	Start	End	Length	Cov(%)
AT1G10820.2	188	239	258	20.15

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold9264	Augustus	mRNA	5430	7281	.	+	.	ID=Dca60583.1;Parent=Dca60583
scaffold9264	Augustus	exon	5430	5525	.	+	.	ID=Dca60583.1.exon1;Parent=Dca60583.1
scaffold9264	Augustus	exon	5807	5877	.	+	.	ID=Dca60583.1.exon2;Parent=Dca60583.1
scaffold9264	Augustus	exon	5979	6075	.	+	.	ID=Dca60583.1.exon3;Parent=Dca60583.1
scaffold9264	Augustus	exon	6471	6570	.	+	.	ID=Dca60583.1.exon4;Parent=Dca60583.1
scaffold9264	Augustus	exon	6980	7281	.	+	.	ID=Dca60583.1.exon5;Parent=Dca60583.1