Carnation DB

Dca606.1

Annotation

7-exons
f-1
sp|B9SDG2_RICCO#30S ribosomal protein S5, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1517490#GO:0005840;GO:0003723;GO:0003735;GO:0006412#2F1P1C
Repeat List (scaffold1012)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca606.1	72	519	520	46.34	448	54	6e-129
Target_name	Start	End	Length	Cov(%)
sp\|B9SDG2_RICCO	61	502	502	88.04

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca606.1	103	519	520	42.11	417	53	3e-115
Target_name	Start	End	Length	Cov(%)
AT1G64880.1	110	515	515	78.83

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1012	Augus-PASA	mRNA	110892	115523	.	-	.	ID=Dca606.1;Parent=Dca606
scaffold1012	Augus-PASA	exon	110892	110960	.	-	.	ID=Dca606.1.exon1;Parent=Dca606.1
scaffold1012	Augus-PASA	exon	111053	111112	.	-	.	ID=Dca606.1.exon2;Parent=Dca606.1
scaffold1012	Augus-PASA	exon	111262	111360	.	-	.	ID=Dca606.1.exon3;Parent=Dca606.1
scaffold1012	Augus-PASA	exon	111471	111566	.	-	.	ID=Dca606.1.exon4;Parent=Dca606.1
scaffold1012	Augus-PASA	exon	111978	112136	.	-	.	ID=Dca606.1.exon5;Parent=Dca606.1
scaffold1012	Augus-PASA	exon	112800	113323	.	-	.	ID=Dca606.1.exon6;Parent=Dca606.1
scaffold1012	Augus-PASA	exon	114968	115523	.	-	.	ID=Dca606.1.exon7;Parent=Dca606.1