Dca60635.1
Annotation
- 3-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold9282)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca60635.1 |
1440 |
1575 |
1591 |
4.9 |
136 |
58 |
4e-40
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
1355 |
1490 |
1501 |
9.06 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca60635.1 |
1458 |
1578 |
1591 |
2.76 |
121 |
35 |
4e-08
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
1367 |
1480 |
1539 |
7.4 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold9282 |
Augustus |
mRNA |
94 |
5524 |
. |
- |
. |
ID=Dca60635.1;Parent=Dca60635 |
| scaffold9282 |
Augustus |
exon |
94 |
536 |
. |
- |
. |
ID=Dca60635.1.exon1;Parent=Dca60635.1 |
| scaffold9282 |
Augustus |
exon |
1101 |
5303 |
. |
- |
. |
ID=Dca60635.1.exon2;Parent=Dca60635.1 |
| scaffold9282 |
Augustus |
exon |
5395 |
5524 |
. |
- |
. |
ID=Dca60635.1.exon3;Parent=Dca60635.1 |
