Carnation DB

Dca60729.1

Annotation

20-exons
f-1
sp|D7THS3_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_08s0007g09020#GO:0005524;GO:0003677;GO:0004386#3F0P0C
AT3G12810.1 | Symbols: PIE1, SRCAP, chr13 | SNF2 domain-containing protein / helicase domain-containing protein | chr3:4065636-4073992 FORWARD LENGTH=2055
Repeat List (scaffold9302)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca60729.1	7	1322	1340	73.73	1316	74	0
Target_name	Start	End	Length	Cov(%)
sp\|D7THS3_VITVI	181	1525	1557	86.38

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca60729.1	2	1318	1340	69.85	1317	68	0
Target_name	Start	End	Length	Cov(%)
AT3G57300.2	171	1525	1540	87.98

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold9302	Augustus	mRNA	840	8421	.	-	.	ID=Dca60729.1;Parent=Dca60729
scaffold9302	Augustus	exon	840	1118	.	-	.	ID=Dca60729.1.exon1;Parent=Dca60729.1
scaffold9302	Augustus	exon	1555	1713	.	-	.	ID=Dca60729.1.exon2;Parent=Dca60729.1
scaffold9302	Augustus	exon	1815	2012	.	-	.	ID=Dca60729.1.exon3;Parent=Dca60729.1
scaffold9302	Augustus	exon	2132	2288	.	-	.	ID=Dca60729.1.exon4;Parent=Dca60729.1
scaffold9302	Augustus	exon	2438	2532	.	-	.	ID=Dca60729.1.exon5;Parent=Dca60729.1
scaffold9302	Augustus	exon	3079	3186	.	-	.	ID=Dca60729.1.exon6;Parent=Dca60729.1
scaffold9302	Augustus	exon	3275	3535	.	-	.	ID=Dca60729.1.exon7;Parent=Dca60729.1
scaffold9302	Augustus	exon	3625	4167	.	-	.	ID=Dca60729.1.exon8;Parent=Dca60729.1
scaffold9302	Augustus	exon	4541	4687	.	-	.	ID=Dca60729.1.exon9;Parent=Dca60729.1
scaffold9302	Augustus	exon	4804	5031	.	-	.	ID=Dca60729.1.exon10;Parent=Dca60729.1
scaffold9302	Augustus	exon	5450	5507	.	-	.	ID=Dca60729.1.exon11;Parent=Dca60729.1
scaffold9302	Augustus	exon	5613	5762	.	-	.	ID=Dca60729.1.exon12;Parent=Dca60729.1
scaffold9302	Augustus	exon	6096	6221	.	-	.	ID=Dca60729.1.exon13;Parent=Dca60729.1
scaffold9302	Augustus	exon	6354	6526	.	-	.	ID=Dca60729.1.exon14;Parent=Dca60729.1
scaffold9302	Augustus	exon	6595	6675	.	-	.	ID=Dca60729.1.exon15;Parent=Dca60729.1
scaffold9302	Augustus	exon	6800	6908	.	-	.	ID=Dca60729.1.exon16;Parent=Dca60729.1
scaffold9302	Augustus	exon	6999	7387	.	-	.	ID=Dca60729.1.exon17;Parent=Dca60729.1
scaffold9302	Augustus	exon	7485	7595	.	-	.	ID=Dca60729.1.exon18;Parent=Dca60729.1
scaffold9302	Augustus	exon	7685	7885	.	-	.	ID=Dca60729.1.exon19;Parent=Dca60729.1
scaffold9302	Augustus	exon	7972	8421	.	-	.	ID=Dca60729.1.exon20;Parent=Dca60729.1