Dca60817.1
Annotation
- 4-exons
- f-1
- sp|B9MUS1_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_589889#GO:0005634;GO:0003700;GO:0000976;GO:0006351#2F1P1C
- AT4G16780.1 | Symbols: ATHB-2, HAT4, ATHB2, HB-2 | homeobox protein 2 | chr4:9449291-9450604 FORWARD LENGTH=284
- Repeat List (scaffold9338)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca60817.1 |
24 |
231 |
234 |
66.66 |
208 |
68 |
4e-77
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9MUS1_POPTR |
70 |
297 |
302 |
75.49 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca60817.1 |
7 |
219 |
234 |
62.82 |
213 |
66 |
3e-70
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G16780.1 |
49 |
266 |
284 |
76.76 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold9338 |
Augustus |
mRNA |
5163 |
6708 |
. |
- |
. |
ID=Dca60817.1;Parent=Dca60817 |
| scaffold9338 |
Augustus |
exon |
5163 |
5439 |
. |
- |
. |
ID=Dca60817.1.exon1;Parent=Dca60817.1 |
| scaffold9338 |
Augustus |
exon |
5560 |
5639 |
. |
- |
. |
ID=Dca60817.1.exon2;Parent=Dca60817.1 |
| scaffold9338 |
Augustus |
exon |
6063 |
6364 |
. |
- |
. |
ID=Dca60817.1.exon3;Parent=Dca60817.1 |
| scaffold9338 |
Augustus |
exon |
6663 |
6708 |
. |
- |
. |
ID=Dca60817.1.exon4;Parent=Dca60817.1 |
