Dca60930.1
Annotation
- 2-exons
- f-1
- sp|B1N668_SOLLC#Copia LTR rider#Solanum lycopersicum (Tomato) (Lycopersicon esculentum)#ORFNames=LYC_68t000004, SUNLYC_67t000007#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold938)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca60930.1 |
227 |
279 |
279 |
15.05 |
53 |
80 |
3e-18
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B1N668_SOLLC |
1081 |
1133 |
1307 |
4.05 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca60930.1 |
2 |
116 |
279 |
17.56 |
115 |
42 |
1e-19
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
645 |
762 |
1401 |
8.42 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold938 |
Augustus |
mRNA |
45437 |
46374 |
. |
- |
. |
ID=Dca60930.1;Parent=Dca60930 |
| scaffold938 |
Augustus |
exon |
45437 |
45862 |
. |
- |
. |
ID=Dca60930.1.exon1;Parent=Dca60930.1 |
| scaffold938 |
Augustus |
exon |
45961 |
46374 |
. |
- |
. |
ID=Dca60930.1.exon2;Parent=Dca60930.1 |
