Carnation DB

Dca6110.1

Annotation

6-exons
f-1
sp|A5AFE2_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_041217#GO:0003676;GO:0008270;GO:0015074#2F1P0C
Repeat List (scaffold12386)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca6110.1	240	491	685	17.37	252	45	5e-48
Target_name	Start	End	Length	Cov(%)
sp\|A5AFE2_VITVI	104	365	1269	20.64

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca6110.1	10	167	685	8.75	158	33	2e-12
Target_name	Start	End	Length	Cov(%)
Os01t0153500-00	8	185	244	72.95

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold12386	Augustus	mRNA	2865	6163	.	+	.	ID=Dca6110.1;Parent=Dca6110
scaffold12386	Augustus	exon	2865	3387	.	+	.	ID=Dca6110.1.exon1;Parent=Dca6110.1
scaffold12386	Augustus	exon	3533	3631	.	+	.	ID=Dca6110.1.exon2;Parent=Dca6110.1
scaffold12386	Augustus	exon	4291	5145	.	+	.	ID=Dca6110.1.exon3;Parent=Dca6110.1
scaffold12386	Augustus	exon	5381	5457	.	+	.	ID=Dca6110.1.exon4;Parent=Dca6110.1
scaffold12386	Augustus	exon	5540	5968	.	+	.	ID=Dca6110.1.exon5;Parent=Dca6110.1
scaffold12386	Augustus	exon	6089	6163	.	+	.	ID=Dca6110.1.exon6;Parent=Dca6110.1